Publications

Phil Hyoun Lee, Doheon Lee (2005) Modularized learning of genetic interaction networks from biological annotations and mRNA expression data. Bioinformatics. 21, 2739-2747.




Update News

MONET Version 2.01 is released.

The updated version of MONET is used to utilize KISTI Supercomputing resources and several bugs were fixed. (2009. 6. 25)


The new supercomputers, KISTI Supercomputing Center, are available!

The new supercomputing resources, KISTI Supercomputing Center, are available now. (2009. 6. 25)


The supercomputers are not available now!

Our supercomputer facilities are in inspection. Therefore, the webservice is not available now. Please use local PC mode on Cytoscape version. If you have urgent works, then we can manually help your analysis. Contact us: yhkim@biosoft.kaist.ac.kr (2008. 9. 18)


MONET 1.1.1 is now available.

MONET version 1.1.1 has been released now. This release has been compatible with Cytoscape 2.4 and 2.5 (including 2.5.1 now) (2007. 12. 20)


The knowledge base for Rattus norvegicus is available now.

The production of the knowledge base for Rattus norvegicus has been finished. You are able to perform network inference with Rattus norvegicus data. You can download the knowledge base file. (2006. 11. 8)


The knowledge base for Schizosaccharomyces pombe is available now.

The production of the knowledge base for Schizosaccharomyces pombe has been finished. You are able to perform network inference with Schizosaccharomyces pombe data. You can download the knowledge base file. (2006. 11. 3)


The knowledge base for Arabidopsis thaliana is in production now.

Arabidopsis thaliana will be available soon. (2006. 10. 11)


The knowledge base for Drosophila melanogaster is now available!

The production of the knowledge base for Drosophila melanogaster has been finished. You are able to perform network inference with Drosophila melanogaster data. You can download the knowledge base file. (2006. 10. 11)


The knowledge base for Mus musculus is now available!

The production of the knowledge base for Mus musculus has been finished. You are able to perform network inference with Mus musculus data. You can download the knowledge base file. (2006. 9. 26)


New! MONET 1.1 is now available.

MONET version 1.1 has been released now. This release fixes some bugs. The improvements are as follows.

* let it show correctly inference results (error or no-result cases)
* gave it restriction on using organisms that is not available so far in 'remote server' mode. (2006. 9. 26)


The knowledge base for Mus musculus is in production now.

Mus musculus will be available soon. (2006. 9. 19)


Now we are supporting two organisms.

We will support most of organisms that Gene Ontology is supporting. Now we have started network inference service with two major organisms which are Saccharomyces cerevisiae and Homo Sapiens. For use of 'Local PC' mode you can download the knowledge bases for the organisms in the download section of this website. (2006. 9. 6)


A new release of MONET is now available.

MONET version 1.0 has been released now. This has been delveloped as a Cytoscape software's plugin. (Cytoscape is famous software for visualizing biological interaction networks) You can download and use it right now. (2006. 9. 6)



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